The detailed information of tRNA gene sequence


Sequence ID>R05100172
Genome IDAP008208
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr02
Start position on genome 3623224
End posion on genome 3623300
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taatggaatttatttgagacaaatcggagtcagtaatggactttttcaaattttttggattcaagaattgtatcgatgtcccattcgaacaggcatcaaa
tRNA gene sequence 
GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCAGGTGTGACCCGGGTTCGAT
CCCCGGCAACGGCGTTT
Downstream region at tRNA end position 
ccattttttttaatatgaacgcgtctagtccgaatcgaattttggtcgggtacatatattttttacaccgatcgattcataccaacgatcgatcctacat
Secondary structure (Cloverleaf model)
>R05100172	Asp	GTC
                   a      GTTT ccattttttttaatatgaacgcgtctagtccgaatcgaattttggtcgggtacatatattttttacaccgatcgattcataccaacgatcgatcctacat
                     G - C
                     T + G
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C          C T
                    T     G G C C C     A
    G T G A        A      | | | | |     G
  G         T A T G       C C G G G     C
  T         | |   |                 T T
  G         A T T C
    A G T          C     TGAC
                    C - G
                    G + T
                    C - G
                    C - G
                    T - A
                  G       C
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK