The detailed information of tRNA gene sequence


Sequence ID>R05100187
Genome IDAP008208
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr02
Start position on genome 26656745
End posion on genome 26656819
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggaagtactggaatgttcaggcataacaagagttgggattatgcaccacggcattataatgaactgttaaaaaaagtttatatacacatttctcaacaaa
tRNA gene sequence 
GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCGAGTTCAATTC
TCGGAATGCCCCCAC
Downstream region at tRNA end position 
tttttttttcagaatacaaaatcactttttttttcagaatacaaaatcactttttttttcagaatacaaaatgtgttttcttggacattgacaagttctt
Secondary structure (Cloverleaf model)
>R05100187	Pro	TGG
                   a      CCAC tttttttttcagaatacaaaatcactttttttttcagaatacaaaatcactttttttttcagaatacaaaatgtgttttcttggacattgacaagttctt
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     T - A
                     T - A          T T
                    T     G G C T C     A
        G A        G      | | | | |     A
      T     T C T G       C C G A G     C
      G       | | +                 T T
      G     T G A T
        T A        T     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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