The detailed information of tRNA gene sequence


Sequence ID>R05100209
Genome IDAP008208
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr02
Start position on genome 15032200
End posion on genome 15032127
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
attaaattaataaaaagaaaactcaaatagaaaatgaaacggtcgacccagacatagacggtcgacccaggcggatataccctataaaatataggacgta
tRNA gene sequence 
GCGAGCGTAGTTCAATGGTAAAACATCACCTTGCCAAGGAGAAGATACGGGTTCGATTCC
CGCCGCTCGCCAGC
Downstream region at tRNA end position 
ttaatttagtaaggtactatgataaaaaatttagtctacttttattaaagtaataggtgttagtctagtaccatacccctttactatcttaacccccttt
Secondary structure (Cloverleaf model)
>R05100209	Gly	GCC
                   a      CAGC ttaatttagtaaggtactatgataaaaaatttagtctacttttattaaagtaataggtgttagtctagtaccatacccctttactatcttaacccccttt
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T T
                    T     C G C C C     A
        A A        A        | | | |     G
      T     C T T G       A C G G G     C
      G       | | |                 T T
      G     A A A C
        T A        A     AGAT
                    T - A
                    C - G
                    A   A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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