The detailed information of tRNA gene sequence


Sequence ID>R05100232
Genome IDAP008209
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr03
Start position on genome 9651732
End posion on genome 9651808
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
cacgtgcgtggaacctttcctttggaatctctcttcgttctgtgatttttcacagattatatttgtctaagtataaactatgtggaacaaaagcaacaag
tRNA gene sequence 
GACCGCATAGCGCAGTGGATTAGCGCGTCTGACTTCGGATCAGAAGGTCGTGGGTTCGAC
TCCCACTGTGGTCGTTA
Downstream region at tRNA end position 
atttgttgactctttttattttcaccgtatatgtcttatttctgccacgcgttatttattgcgtttatgcttcagtattgctctcgaggatcgtcacaaa
Secondary structure (Cloverleaf model)
>R05100232	Arg	TCG
                   g      GTTA atttgttgactctttttattttcaccgtatatgtcttatttctgccacgcgttatttattgcgtttatgcttcagtattgctctcgaggatcgtcacaaa
                     G - C
                     A - T
                     C - G
                     C - G
                     G + T
                     C - G
                     A - T          T C
                    T     C A C C C     A
      T G A        A      | | | | |     G
    G       C G C G       G T G G G     C
    G       | | | |                 T T
    A       G C G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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