The detailed information of tRNA gene sequence


Sequence ID>R05100269
Genome IDAP008209
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr03
Start position on genome 30237108
End posion on genome 30237033
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gctgagacagcggcctatcagaaaaggccaaaattgcaatggccgtttgtggcaggccggcccggcccaagaagaagtggtggccatatcatcattgaga
tRNA gene sequence 
GCGCCTGTAGCTCAGTGGATAGAGCGTTTGTTTCCTAAACAAAAAGTCGAAGGTTCGAAC
CCTTCCTGGCGCGGCA
Downstream region at tRNA end position 
ttttttaatgcaaatatcttatttaaacaatgccaagttttaaatatcttgtgggacatatggtattataaatgtggatatttgtagtacaataatgtgt
Secondary structure (Cloverleaf model)
>R05100269	Arg	CCT
                   a      GGCA ttttttaatgcaaatatcttatttaaacaatgccaagttttaaatatcttgtgggacatatggtattataaatgtggatatttgtagtacaataatgtgt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T   T
                     G - C          C A
                    T     C T T C C     A
      T G A        A      | | | | |     G
    G       C T C G       G A A G G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     AAGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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