The detailed information of tRNA gene sequence


Sequence ID>W1930003928
Genome IDFNYR01000016
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalohasta litchfieldiae DSM 22187 [FNYR]
Start position on genome 48909
End posion on genome 48980
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttgattgcgt
tRNA gene sequence 
GCCTGGGTAGCTTAGCGGTAAAGCGCGTCCTTGGTAAGGACGAGAGCCCGGATTCAAATT
CCGGCCTAGGCTtca
Downstream region at tRNA end position 
cgtctttctc
Secondary structure (Cloverleaf model)
>W1930003928	Thr	GGT
                   t      Ttca cgtctttctc
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T
                     G - C
                     G - C          T A
                    T     G G C C T     A
        G A        A      | | | | |     A
      C     T T C G       C C G G A     C
      G     | | | |                 T T
      G     A A G C
        T A        G     AGAGC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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