The detailed information of tRNA gene sequence


Sequence ID>R05100298
Genome IDAP008210
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr04
Start position on genome 9230117
End posion on genome 9230193
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgaatagacttatatatctcgatatatacagatataatgtacattatggagtagacctataatgggaaatgaaagtggctaattttggaattgaataagA
tRNA gene sequence 
GCCCTTTTAACTCAGTGGTAGAGTAATGCCATGGTAAGGCATAAGTCATCGGTTCAAATC
CGATAAAGGGCTTTT
Downstream region at tRNA end position 
Tttacttagtggtagagtaatgccgcggtaagacgtgagtcagtggttcaaatccgatacagtacttttctactaaattcattcactttctttctttttg
Secondary structure (Cloverleaf model)
>R05100298	Thr	GGT
                   A      TTTT Tttacttagtggtagagtaatgccgcggtaagacgtgagtcagtggttcaaatccgatacagtacttttctactaaattcattcactttctttctttttg
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A
                     T - A          T A
                    T     T A G C C     A
        G A        A      | | | | |     A
      T     C T C A       A T C G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     AAGTC
                    A - T
                    T - A
                    G - C
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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