The detailed information of tRNA gene sequence


Sequence ID>R05100321
Genome IDAP008210
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr04
Start position on genome 26331950
End posion on genome 26332027
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tcgttagcagccatactagctttcaattgttctccatgggagattagcagagactacagtggttttatagttaaagctatgtacgaaaaacttgaacgtT
tRNA gene sequence 
GGTCGCGTGGCCTAATGGATAAGGCGCTCGCCTCCGGAGCGGGAGATTGTGGGTTCGAGT
CCCACCGTGATCGATT
Downstream region at tRNA end position 
Tttttacctttttatacatcgagttgcaaaccaaaacgaattggaatttgattgttcttttacatgtttgcaatgcaaaccaaaccgaattggaatttga
Secondary structure (Cloverleaf model)
>R05100321	Arg	CCG
                   T      GATT Tttttacctttttatacatcgagttgcaaaccaaaacgaattggaatttgattgttcttttacatgtttgcaatgcaaaccaaaccgaattggaatttga
                     G - C
                     G + T
                     T - A
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       T C C G       G T G G G     C
    G       | | | |                 T T
    A       A G G C
      T A          G     AGATT
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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