The detailed information of tRNA gene sequence


Sequence ID>W1930009593
Genome IDJFZT01000039
Search identical group
Phylum/ClassThermoproteota
SpeciesCandidatus Acidianus copahuensis copahuensis ALE1 [JFZT]
Start position on genome 39183
End posion on genome 39256
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
taaaatatgt
tRNA gene sequence 
GCCGCAGTAGCTCAGCCTAGTAGAGCGCTGCCCTGGTAAGGCAGAGGTCCCGGGTTCAAA
TCCCGGCCGCGGCTtat
Downstream region at tRNA end position 
ttcttgttat
Secondary structure (Cloverleaf model)
>W1930009593	Thr	GGT
                   t      Ttat ttcttgttat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     A   C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    A       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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