The detailed information of tRNA gene sequence


Sequence ID>R05100343
Genome IDAP008210
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr04
Start position on genome 24155866
End posion on genome 24155790
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgaatatttgccatctctgaatattttcgatttcatttttctatgatatgtctttctatatgaaaattggttatttacgatgtacgatgatccctgttaa
tRNA gene sequence 
GCATCCATGGCTGAATGGTTAAAGCGCCCAACTCATAATTGGTAAATTTGCAGGTTCAAT
TCCTGCTGGATGCACGC
Downstream region at tRNA end position 
gaaccggaacgttccataagtctattggaactggctctctatccatggaatctcatccatcatccatacataacgaattggtatggtatattcataccat
Secondary structure (Cloverleaf model)
>R05100343	Met	CAT
                   a      ACGC gaaccggaacgttccataagtctattggaactggctctctatccatggaatctcatccatcatccatacataacgaattggtatggtatattcataccat
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     C - G
                     A - T          T T
                    T     C G T C C     A
      T A A        G      | | | | |     A
    G       G T C G       G C A G G     C
    G         | | |                 T T
    T       A A G C
      T A          G     AAATTT
                    C   T
                    C - G
                    C - G
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK