The detailed information of tRNA gene sequence


Sequence ID>W1930012639
Genome IDMEKZ01000427
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22 [MEKZ]
Start position on genome 10244
End posion on genome 10147
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aattcctgac
tRNA gene sequence 
GGAAGCGAAACTGGTCTGGTGACTGGCCCGGCCTTCAAAGCCGCTGGTCCTTCTCTTCGG
AGGGGGACGATGGGTTCGATTCCCATACGCTTCCGCCA
Downstream region at tRNA end position 
gttcattatc
Secondary structure (Cloverleaf model)
>W1930012639	SeC	TCA
                   c      GCCA gttcattatc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   A          T T
                    A     T A C C C     A
      T C T        A      | | | | |     G
    G       G G T C       A T G G G     C
    G       | + + |                 T T
    T       C T G G
      G A          C     TGGTCCTTCTCTTCGGAGGGGGACG
                    C   C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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