The detailed information of tRNA gene sequence


Sequence ID>W1930013733
Genome IDMFIM01000003
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Giovannonibacteria bacterium RIFCSPLOWO2_02_FULL_45_28 [MFIM]
Start position on genome 5965
End posion on genome 6039
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tggaatagtc
tRNA gene sequence 
GCGCCCTTAGCTCAGTGGTAGAGCGTTCGGTTCACATCCGAAAGGTCGTAGGTCCGATCC
CTACAGGGCGCACCA
Downstream region at tRNA end position 
cgttggaaaa
Secondary structure (Cloverleaf model)
>W1930013733	Val	CAC
                   c      ACCA cgttggaaaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          C T
                    T     C A T C C     A
        G A        A      | | | | |     G
      T     C T C G       G T A G G     C
      G     | | | |                 T C
      G     G A G C
        T A        G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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