The detailed information of tRNA gene sequence


Sequence ID>R05100373
Genome IDAP008211
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr05
Start position on genome 420865
End posion on genome 420947
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
aaaatcatcttttgttgttcttctgtcatgcagaaactttagtcaatccagttttttataaaccatttaaaataattcttatatgcagtaagccagcaaa
tRNA gene sequence 
GACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGTCCGAAAGGGCGTGGG
TTCAAATCCCACAGCTGTCATTT
Downstream region at tRNA end position 
tttttccttttttgctattattcttgctttaattttctttttcacaaatgttatgaatctcccagaacagtaattcctcctttcgcaactattcttgctt
Secondary structure (Cloverleaf model)
>R05100373	Leu	TAG
                   a      ATTT tttttccttttttgctattattcttgctttaattttctttttcacaaatgttatgaatctcccagaacagtaattcctcctttcgcaactattcttgctt
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TCCGAAAGGGC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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