The detailed information of tRNA gene sequence


Sequence ID>W1930015902
Genome IDMGRI01000062
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesDeltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_40_11 [MGRI]
Start position on genome 24476
End posion on genome 24378
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aagccgagat
tRNA gene sequence 
GGAAGTGGTTAAGTCGCTGGTGCACTTTCTGGATTTCAAATCCTTGAGCAGATATCTATC
GGTACCTGCGGTGGGTTCGATTCCCATACACTTCCGCCA
Downstream region at tRNA end position 
acgatcccct
Secondary structure (Cloverleaf model)
>W1930015902	SeC	TCA
                   t      GCCA acgatcccct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   A          T T
                    T     T A C C C     A
      C G C        T      + | | | |     G
    T       T G A A       G T G G G     C
    G       | | | |                 T T
    G       A C T T
      T G C        T     GAGCAGATATCTATCGGTACCTGCG
                    C   T
                    T   T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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