The detailed information of tRNA gene sequence


Sequence ID>W1930016680
Genome IDMHOT01000027
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_02_FULL_42_22 [MHOT]
Start position on genome 5709
End posion on genome 5636
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgcggggttt
tRNA gene sequence 
GGGCCTGTAGTAAAGTGGCATTACGTACCCTTCGCATGGGTAAAGCGGCGGTCCGATTCC
GCCCAGGTCCACCA
Downstream region at tRNA end position 
ctcaaatttt
Secondary structure (Cloverleaf model)
>W1930016680	Ala	CGC
                   t      ACCA ctcaaatttt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     C C G C C     A
        G A        A      | | | | |     G
      T     A A T G       G G C G G     C
      G     | | | |                 T C
      G     T T A C
        C A        G     AAGC
                    T - A
                    A - T
                    C - G
                    C - G
                    C - G
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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