The detailed information of tRNA gene sequence


Sequence ID>W1930017569
Genome IDMHYS01000124
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetes bacterium RIFCSPHIGHO2_02_FULL_52_58 [MHYS]
Start position on genome 4143
End posion on genome 4048
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acacttagaa
tRNA gene sequence 
GGGAATGGATGGGGCCCGGTGGCCCTGACGGTCTTCAAAACCGCTTAGACCCCCAAAAAG
GGGTTTGGTGGGTTCGACTCCCACACGTTCCCGCCA
Downstream region at tRNA end position 
tcaattgtag
Secondary structure (Cloverleaf model)
>W1930017569	SeC	TCA
                   a      GCCA tcaattgtag
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     G   A          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    G       G G G G       G T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          G     TTAGACCCCCAAAAAGGGGTTTG
                    A   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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