The detailed information of tRNA gene sequence


Sequence ID>R05100405
Genome IDAP008211
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr05
Start position on genome 22953824
End posion on genome 22953747
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gcgaaggacatgaaccgcttgattggtttagtaggccaggtagtaatagggctagtcatgtactcgtttacatatgtaaacttctcctctcaaaacattT
tRNA gene sequence 
TCCGTTGTAGTCTAGCTGGTTAGGATACTCGGCTCTCACCCGAAAGACCCGGGTTCGAGT
CCCGGCAACGGAATTT
Downstream region at tRNA end position 
Tttttgtttgcaaaaggtagtcgttttttgtcggcaaaaggtagtgatgttttttttggtcttgagaaaacgatagcacatctaactgcttattgtattc
Secondary structure (Cloverleaf model)
>R05100405	Glu	CTC
                   T      ATTT Tttttgtttgcaaaaggtagtcgttttttgtcggcaaaaggtagtgatgttttttttggtcttgagaaaacgatagcacatctaactgcttattgtattc
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C          T G
                    T     G G C C C     A
      C G A        A      | | | | |     G
    T       T C T G       C C G G G     C
    G       + | | +                 T T
    G       G G A T
      T T A        A     AGAC
                    C   A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK