The detailed information of tRNA gene sequence


Sequence ID>R05100412
Genome IDAP008211
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr05
Start position on genome 17937853
End posion on genome 17937777
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tgcatttgaccagctagagtagttgattgtgtttaagtgcgataataagtagttcaattatttatcacacaccttaagtagttcaatcatttatcacaca
tRNA gene sequence 
GCTGGAGTAGCTCAGTTGGTTAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCAAG
CCCTCTCTCTAGCGTTT
Downstream region at tRNA end position 
atattccttttaaaccattttctaatagaaagaaaataattttattttctttttaatccagcgcttatatttatttccttctttctaataattttatttt
Secondary structure (Cloverleaf model)
>R05100412	Asn	GTT
                   a      GTTT atattccttttaaaccattttctaatagaaagaaaataattttattttctttttaatccagcgcttatatttatttccttctttctaataattttatttt
                     G - C
                     C - G
                     T - A
                     G + T
                     G - C
                     A - T
                     G - C          C G
                    T     T C T C C     A
      T G A        A      + | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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