The detailed information of tRNA gene sequence


Sequence ID>R05100425
Genome IDAP008212
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr06
Start position on genome 1094287
End posion on genome 1094364
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atactataataacataccaataacgaagcggtatttgcttataaaaaggattcgatctataatcgatcgaagtaaagggtcttcctttgtggtgataaaT
tRNA gene sequence 
GCCTACTTAACTCAGTGGTCAGAGTATTGCTTTCATACGGCGGGAGTCATTGGTTCAAAT
CCAATAGTAGGTAGGT
Downstream region at tRNA end position 
Aggtagaaaaattactagatagcattggccctactttacttcgctatctaataattttttctacccctcttccctttttctttgtatcaactaaaccatt
Secondary structure (Cloverleaf model)
>R05100425	Met	CAT
                   T      AGGT Aggtagaaaaattactagatagcattggccctactttacttcgctatctaataattttttctacccctcttccctttttctttgtatcaactaaaccatt
                     G + T
                     C - G
                     C - G
                     T - A
                     A - T
                     C - G
                     T - A          T A
                    T     T A A C C     A
      T G A        A      | | | | |     A
    G       C T C A       A T T G G     C
    G       | | | |                 T T
    T       G A G T
      C A          A     GAGTC
                    T + G
                    T + G
                    G - C
                    C - G
                    T + G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK