The detailed information of tRNA gene sequence


Sequence ID>R05100434
Genome IDAP008212
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr06
Start position on genome 29057369
End posion on genome 29057451
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tgaagattctaatgtcctaaattctatggaatcttccaatctcgacgattcgcgagaaaataacttaatattcttttaataaacctgttatttcaactta
tRNA gene sequence 
GCCGCCATGGTGAAATTGGTAGACACGCTGCTCTTAGGAAGCAGTGCTCAAGCATCTCGG
TTCGAGTCCGAGTGGCGGCAGTC
Downstream region at tRNA end position 
tcgaaaaagaatacaatagattataaaataaaatggattcaattcgaaatttccaattttgtaatgggaccttctccttatgctatttgcaactttagaa
Secondary structure (Cloverleaf model)
>R05100434	Leu	TAG
                   a      AGTC tcgaaaaagaatacaatagattataaaataaaatggattcaattcgaaatttccaattttgtaatgggaccttctccttatgctatttgcaactttagaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T          T G
                    T     G A G C C     A
      T A A        G      | | | | |     G
    T       A G T G       C T C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCTCAAGCAT
                    C - G
                    T - A
                    G - C
                    C - G
                    T - A
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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