The detailed information of tRNA gene sequence


Sequence ID>R05100447
Genome IDAP008212
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr06
Start position on genome 7000843
End posion on genome 7000759
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
atcgatcgacatactccaagactccacctttgtcatatattccatatatcacattagatagatatcatattccatcatggaatatgattcactttcaagT
tRNA gene sequence 
GCCTTGATGGTGAAATGGTAGACACGCGAGACTGAAAATCTCGTGCAAAGAGCGTGGAGG
TTCGAGTCCTCTTCAAGGCATAA
Downstream region at tRNA end position 
Tacggagaatgctcataacgtggtacaagaaagaaaaataaaaaaccataaggaatatattgtatcatgttttacggtttaaggatatgacttaaactcg
Secondary structure (Cloverleaf model)
>R05100447	Phe	GAA
                   T      ATAA Tacggagaatgctcataacgtggtacaagaaagaaaaataaaaaaccataaggaatatattgtatcatgttttacggtttaaggatatgacttaaactcg
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C
                     A - T          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    G       A G T G       G G A G G     C
    G         | | |                 T T
    T       A C A C
      A G          G     TGCAAAGAGCGT
                    C - G
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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