The detailed information of tRNA gene sequence


Sequence ID>R05100458
Genome IDAP008213
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr07
Start position on genome 3402352
End posion on genome 3402426
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ggacgtcgtcttgtggtggagggtggcacggcatcgttggaccacgtgccctccttcaaaacaagcactagaaattagtagtatgacttttgaataaaag
tRNA gene sequence 
GCGTTTGTAGTCCAACGGTTAGGATAATTGCCTTCCAAGCAATAGACCCGGGTTCGACTC
CCGGCAAACGCATTT
Downstream region at tRNA end position 
ttgtaattttttttcattttttgtcaaacacacacatatcttttcttttcttttttttcattttttgtcaaacacacaaaacacacatatatcttttctt
Secondary structure (Cloverleaf model)
>R05100458	Gly	TCC
                   g      ATTT ttgtaattttttttcattttttgtcaaacacacacatatcttttcttttcttttttttcattttttgtcaaacacacaaaacacacatatatcttttctt
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A
                     T - A
                     G - C          T C
                    T     G G C C C     A
      C A A        A      | | | | |     G
    G       C C T G       C C G G G     C
    G       | | | +                 T T
    T       G G A T
      T A          A     AGAC
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK