The detailed information of tRNA gene sequence


Sequence ID>R05100459
Genome IDAP008213
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr07
Start position on genome 3692188
End posion on genome 3692261
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ttattttttgaacggaaaaattcgtcaagtgttgttgttcctttgcctaaacgggacagcagctgataattatagttacatcgcattaccactcaagaac
tRNA gene sequence 
GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCC
CGGCTGGTGCAATT
Downstream region at tRNA end position 
tttatttttttccctcgttgttctttgtttgctgcaagttctcagctcatgatgtttttcattccaatttataggtggcttgtttaaattgcaaagcatt
Secondary structure (Cloverleaf model)
>R05100459	Gly	GCC
                   c      AATT tttatttttttccctcgttgttctttgtttgctgcaagttctcagctcatgatgtttttcattccaatttataggtggcttgtttaaattgcaaagcatt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     T C T G       C C G G G     C
      G     +   | +                 T T
      G     G A A T
        T A        A     AGAC
                    G - C
                    T - A
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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