The detailed information of tRNA gene sequence


Sequence ID>W143000928
Genome IDAMCW01000173
Search identical group
Phylum/ClassPlanctomycetota
SpeciesRhodopirellula baltica SH28 [AMCW]
Start position on genome 14543
End posion on genome 14470
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaggcccttc
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCGCTGCTTTCACACGGCAGAGGCCACAGATTCGAA
TTCTGTATCGCCCAttt
Downstream region at tRNA end position 
cggcagctcg
Secondary structure (Cloverleaf model)
>W143000928	Val	CAC
                   c      Attt cggcagctcg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G T C T     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G A     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    T + G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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