The detailed information of tRNA gene sequence


Sequence ID>R05100531
Genome IDAP008215
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr09
Start position on genome 5315502
End posion on genome 5315594
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagagtctttctcgctcagtaaagaagagtacgcgcgctacggcttacgcagtggatcttcgggcaaccaacccggcacatccaattccgatcaacaacT
tRNA gene sequence 
GGAGGTATGGCTGAGTGGCATAAGGCATTGGTTTGCTAAATCGACATACAAGAAGATTGT
ATCATGGGTTCGAATCCCATTTCCTCCGGCA
Downstream region at tRNA end position 
Cggaagtagaacgggcgggcgaaattacgtgagagaaagaacctcagattgatggagtccgccgtcggatagaatagcactacttagtgactaggagcgg
Secondary structure (Cloverleaf model)
>R05100531	Ser	GCT
                   T      GGCA Cggaagtagaacgggcgggcgaaattacgtgagagaaagaacctcagattgatggagtccgccgtcggatagaatagcactacttagtgactaggagcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T   T
                     A - T          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       A T G G G     C
    G         + | |                 T T
    C       A G G C
      A T A        A     CATACAAGAAGATTGTATC
                    T - A
                    T + G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK