The detailed information of tRNA gene sequence


Sequence ID>R05100552
Genome IDAP008215
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr09
Start position on genome 15213288
End posion on genome 15213210
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
agtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaataatgatgaatggaaaaaagagaaaatcctttagctggataagG
tRNA gene sequence 
GCGGATGTAGCCAAGTGGATCAAGGCAGTGGATTGTGAATCCACCATGCGCGGGTTCAAT
TCCCGTCGTTCGCCCAT
Downstream region at tRNA end position 
Cccattattgcaaattccaaaaatgcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcactatattttttcctttt
Secondary structure (Cloverleaf model)
>R05100552	His	GTG
                   G      CCAT Cccattattgcaaattccaaaaatgcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcactatattttttcctttt
                     G - C
                     C - G
                     G - C
                     G + T
                     A - T
                     T + G
                     G - C          T T
                    T     T G C C C     A
      T G A        A      + | | | |     A
    G       A C C G       G C G G G     C
    G         | | |                 T T
    A       A G G C
      T C A        A     CATGC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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