The detailed information of tRNA gene sequence


Sequence ID>R05100553
Genome IDAP008215
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr09
Start position on genome 14524559
End posion on genome 14524486
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
agattaaaagctatgattattgttaccgcccagattgatgtcccaacaacgagaaacaaaatgctataattatagtgtcttgagttaagtcactgttaaa
tRNA gene sequence 
GCGCATCTGGTGTAGTGGTATCATAGTACCCTCCCACGGTACTGACCGGGGTTCGATTCC
CCGGATGCGCACTC
Downstream region at tRNA end position 
gcacttattttttattttcgttttgttcgttaattacagtatacttatttttttattttctttttgttcgttaattacagtattttttttttatgcaggc
Secondary structure (Cloverleaf model)
>R05100553	Gly	CCC
                   a      ACTC gcacttattttttattttcgttttgttcgttaattacagtatacttatttttttattttctttttgttcgttaattacagtattttttttttatgcaggc
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G          T T
                    T     G C C C C     A
        G A        G      | | | | |     G
      T     T G T G       C G G G G     C
      G       | | +                 T T
      G     T C A T
        T A        A     TGAC
                    G - C
                    T - A
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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