The detailed information of tRNA gene sequence


Sequence ID>R05100578
Genome IDAP008216
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr10
Start position on genome 20958141
End posion on genome 20958219
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
gaaaggggctttcccatcttcttaacccgaaatgaaatggctgaggagagggaggttccttttgggggtacccccgggaagagatccagtggagacgggT
tRNA gene sequence 
GGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCACGGTGTCGGGGGTTCGAA
TCCCTCCTCGCCCACAG
Downstream region at tRNA end position 
Ccttccaaaggggaagggcctttactttccccctgagggtaggaaaaccatgatcgggatagcggacgtaaagctattgaacttgggtatgctctttcct
Secondary structure (Cloverleaf model)
>R05100578	Arg	ACG
                   T      ACAG Ccttccaaaggggaagggcctttactttccccctgagggtaggaaaaccatgatcgggatagcggacgtaaagctattgaacttgggtatgctctttcct
                     G - C
                     G - C
                     G - C
                     C - G
                     C   C
                     T   T
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      T T A        A     GTGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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