The detailed information of tRNA gene sequence


Sequence ID>R05100580
Genome IDAP008216
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr10
Start position on genome 20974986
End posion on genome 20975060
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tgtatatgcatttgtttttctttcctaaaagagttttggtctaacagttttttctcttggtccgataaaaaatgaaaagaaagaagaaaatatgaaaaaa
tRNA gene sequence 
GCGTCCATTGTCTAATGGATAGGACAGAGGTCTTCTAAACCTTTGGTATAGGTTCAAATC
CTATTGGACGCAATC
Downstream region at tRNA end position 
ttatttctatctattctttaaataactatactaaaaactaagaaaacttttttgcatgattcaaatgaaaaatctttctcaacgatttctcctctactac
Secondary structure (Cloverleaf model)
>R05100580	Arg	TCT
                   a      AATC ttatttctatctattctttaaataactatactaaaaactaagaaaacttttttgcatgattcaaatgaaaaatctttctcaacgatttctcctctactac
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     C - G
                     A - T          T A
                    T     T A T C C     A
      T A A        T      | | | | |     A
    G       T C T G       A T A G G     C
    G       + | | |                 T T
    A       G G A C
      T A          A     TGGT
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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