Sequence ID | >R05800004 |
Genome ID | AP008218 |
Phylum/Class | Plant |
Species | Oryza sativa Japonica Group |
Chromosome
|
chr12
|
Start position on genome
|
19610692
|
End posion on genome
|
19610603
|
Amino Acid
|
Met
|
Anticodon
|
CAT
|
Upstream region at tRNA start position
|
gcgcgctttatattatagggtggagggagtactccactaaataatatattagtggatcaccaataatgaattagtttatccagagagtggatgacacgac
|
tRNA gene sequence
|
GGGGTGGTGGCGCAGTTGGCTAGCGCGTAGGTCTCATAATCCTGAGGTCGAGAGTTCGAG CCTCTCTCACCCCAacc
|
Downstream region at tRNA end position
|
gtccattccagcgatgatgaaatttgctcctggcaacttgggtcgccagtgttcatctgactttgaaatgatgtgagcattccttgagctggattttttt
|
Secondary structure (Cloverleaf model) | >R05800004 Met CAT
c Aacc gtccattccagcgatgatgaaatttgctcctggcaacttgggtcgccagtgttcatctgactttgaaatgatgtgagcattccttgagctggattttttt
G - C
G - C
G - C
G - C
T - A
G - C
G + T C G
T C T C T C A
T G A G | | | | | G
T C G C G G A G A G C
G | | | | T T
G G C G C
C T A G AGGTC
T + G
A - T
G - C
G - C
T T
C A
T A *
C A T
intron: position=38, length=16 (in A-loop)
GCTAATATTGTGAGTG
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [RAP-DB] |