Sequence ID | >R05900041 |
Genome ID | AP008210 |
Search identical group | |
Phylum/Class | Plant |
Species | Oryza sativa Japonica Group |
Chromosome | chr04 |
Start position on genome | 9461945 |
End posion on genome | 9462831 |
Amino Acid | Ala |
Anticodon | TGC |
Upstream region at tRNA start position |
cgggcgaggtctctggttcaagtccaggatggcccagctgcgccagggaaaagaatagaagaagcatctgactctttcatgcatactccacttggctcgg |
tRNA gene sequence |
GGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCATGGCGGATGTCAGCGGTTCGAGT |
Downstream region at tRNA end position |
gtgaacttagcggatactatgatagcaccgaattttgccaattcggcagttcgatctatgatttcgcattcatggacgttgataagatccttccatttag |
Secondary structure (Cloverleaf model) | >R05900041 Ala TGC g AGCc gtgaacttagcggatactatgatagcaccgaattttgccaattcggcagttcgatctatgatttcgcattcatggacgttgataagatccttccatttag G - C G - C G + T G - C A - T T - A A - T T G T T C G C C A T G A A | | | | | G T C T C G A G C G G C G | | | | T T G G A G C T A T ATGTC C - G C - G G - C C - G T + G C T T A * T G C intron: position=38, length=811 (in A-loop) ATTGGGTCGTTGCGATTACGGGTTGGCTGTCTAATTGTCCAGGCGGTAATGGTAGTATCTTGTACCTGAA CCGGTGGCTCACTTTTTCTAAGTAATGGGGAAGAGGACTGAAACATGCCACTGAAAGACTCTACTGAGAC AAAAAGATGGGCTGTCAAAAAGGTAGAGGAGGTAGGATGGGCAGTTGGTCAGATCTAGTATGGATCGTAC ATGGACGCTAGTTGGAGTCGGCGGCTCTCCTAGGCTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAA GTTGGCCCTTGCGAATAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGTGGCAAAAGGAAG GAAAATCCATGGACCGACCCCATTATCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCG GCGTCCAGGGGTCACGGACCGACCATAGACCCTGTTCAATAAGTGGAACACATTAGCCGTCCGCTCTCCG GTTGGGCAGTAAGGGTCGGAGAAGGGCAATCACTCGTTCTTAAAACCAGCATTCTTAAGTTTAAGATCAA AGAGTCGGGCGGAAAAAGGGGAGAGCTCCCCGTTCCTGGTTCTCCTGTAGCTGGATTCCCCGGAACCACA AGAATCCTTAGAATGGGATTCCAACTCAGCACCTTTTGTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGA GAGCACAGTACGATGAAAGTTGTAAGCTGTGTTCGGGGGGGAGTTATTGTCTATCGTTGGCCTCTATGGT AGAACCCGTCGGGGAGGCCTGAGAGGCGGTGGTTTACCCTG |
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [RAP-DB] |
Comment | |
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