The detailed information of tRNA gene sequence


Sequence ID>R05300009
Genome IDAP008217
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr11
Start position on genome 3482161
End posion on genome 3482239
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
atttaaaaaattgacaatatttataatatcaagttagttttattaaatataacattgaatatattttgatgatatgagaaaatcctttagctggataagG
tRNA gene sequence 
ACGGATGTAGCCAAGTTGATCAAGGCAGTGGATTGTGAATCCACCATGCGCGGGTTCAAT
TCCCGTCGTTCGCCCAT
Downstream region at tRNA end position 
Cctatttatttttgttagagatattgctatactttttttatagatttaatcaaacttaaaaaatttgacaaaaaaaagtcaaagcttttataatatgaag
Secondary structure (Cloverleaf model)
>R05300009	His	GTG
                   G      CCAT Cctatttatttttgttagagatattgctatactttttttatagatttaatcaaacttaaaaaatttgacaaaaaaaagtcaaagcttttataatatgaag
                     A   C
                     C - G
                     G - C
                     G + T
                     A - T
                     T + G
                     G - C          T T
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       A C C G       G C G G G     C
    G         | | |                 T T
    A       A G G C
      T C A        A     CATGC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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