The detailed information of tRNA gene sequence


Sequence ID>R05300031
Genome IDAP008208
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr02
Start position on genome 816863
End posion on genome 816787
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cactacgaagaaattccgggagttacgaaagaagcttcggactcatattgttcatgggttgagagcgggagttgaactctaggaggtcgaatcccccctT
tRNA gene sequence 
TCCTCAGTAGCTCAGTGGTAGAGCGGTCGGTTGTTAACTGACTGGTCGTAGGTTCGAATT
CTACTTGGGGAGATT
Downstream region at tRNA end position 
Tgattcattctttaatttaagaataaagaattgaattaaagggcttgctttgacccttaggagtaggtaacccgttcgctatccttgtttctattgcatt
Secondary structure (Cloverleaf model)
>R05300031	Asn	GTT
                   T      GATT Tgattcattctttaatttaagaataaagaattgaattaaagggcttgctttgacccttaggagtaggtaacccgttcgctatccttgtttctattgcatt
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T
                     G + T          T A
                    T     C A T C T     A
        G A        A      | | | | +     G
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TGGTC
                    G - C
                    T - A
                    C - G
                    G + T
                    G - C
                  T       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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