The detailed information of tRNA gene sequence


Sequence ID>R05300081
Genome IDAP008216
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr10
Start position on genome 11220925
End posion on genome 11221002
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tagttatactcttcgagtatattgacaattccaaaaaactgctcatactatcattatagtataatgaggagcggttgtataccgccctatcgtctagtgT
tRNA gene sequence 
GCCCCTATCGTCTAGTGGTTCAGGACATCTCTCTTTCAAGGAGGCAGCGGGGATTCGACT
TCCCCTGGGGGTAGGG
Downstream region at tRNA end position 
Agtattatgaaaggaggttaatcatagattatcaaaaaccctagaataaattcttcctgggtcgatgcccgagcggttaatggggacggactgtaaattc
Secondary structure (Cloverleaf model)
>R05300081	Glu	TTC
                   T      AGGG Agtattatgaaaggaggttaatcatagattatcaaaaaccctagaataaattcttcctgggtcgatgcccgagcggttaatggggacggactgtaaattc
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T C
                    T     C C C C T     A
      T G A        C      | | | | |     G
    G       T C T G       G G G G A     C
    G       + | | |                 T T
    T       G G A C
      T C A        A     CAGC
                    T + G
                    C - G
                    T - A
                    C - G
                    T + G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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