The detailed information of tRNA gene sequence


Sequence ID>R05300084
Genome IDAP008216
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr10
Start position on genome 23154505
End posion on genome 23154431
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tcctaccaagagaatacccccatttttatgttattgaagtaggattgacgaataagaaataaacataatattatttattagtgtcgcataaaacccgaaa
tRNA gene sequence 
TGGGGCGTGGCCAAGTGGTAAGGCAGCGGGTTTTGGTCCCATTACTAGGAGGTTCGAATC
CTTCCATCCCAGATT
Downstream region at tRNA end position 
ttttctgatgaaacgaaagatgaaatcgtattgtattctgcacgagacataaagtttattaaagagaatttttttctcttataatcaagcttttatgaca
Secondary structure (Cloverleaf model)
>R05300084	Gln	TTG
                   a      GATT ttttctgatgaaacgaaagatgaaatcgtattgtattctgcacgagacataaagtttattaaagagaatttttttctcttataatcaagcttttatgaca
                     T - A
                     G - C
                     G - C
                     G - C
                     G + T
                     C   A
                     G - C          T A
                    T     C T T C C     A
        G A        G      | + | | |     G
      T     A C C G       G G A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TACTA
                    G + T
                    C   A
                    G - C
                    G - C
                    G - C
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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