Sequence ID | >R05900012 |
Genome ID | AP008218 |
Phylum/Class | Plant |
Species | Oryza sativa Japonica Group |
Chromosome
|
27
|
Start position on genome
|
11291210
|
End posion on genome
|
11291839
|
Amino Acid
|
Leu
|
Anticodon
|
TAA
|
Upstream region at tRNA start position
|
gaaccgctagactacatagagtaatgaatccaacgattcaaaaaaaactaacagatggaggaaattgcacaagaaatcctggtctcaaagaaaaagaaaT
|
tRNA gene sequence
|
GGGGATATGGCGAAATCGGTAGACGCTACGGACTTAAAATCCGTCGACTTTCTAAGTCGT GAGGGTTCAAGTCCCTCTATCCCCAAAC
|
Downstream region at tRNA end position
|
ctcttttattccctaactctagtatttatcctgttttttttattaataggtttaagattcaatggaatacatttcttttttattatagtatcggcaagga
|
Secondary structure (Cloverleaf model) | >R05900012 Leu TAA
T AAAC ctcttttattccctaactctagtatttatcctgttttttttattaataggtttaagattcaatggaatacatttcttttttattatagtatcggcaagga
G - C
G - C
G - C
G - C
A - T
T - A
A - T T G
T C T C C C A
T A A G | | | | | A
C A G C G G A G G G C
G | | | T T
G A C G C
T A G T CGACTTTCTAAGTCGT
A - T
C - G
G - C
G - C
A - T
C A
T A
T*A A
intron: position=35, length=540 (in A-loop)
GATTGTATTGAGCCTTGGTATGGAAACCTGCTAAGTGGCAATTTCCAAATTCAGAGAAACCCTGGAATTA
AAAAAGGGGCAATCCTGAGCCAATCCATGTTTTGAGAAAACAAGTGGTTCTCGAACTAGAACCCAAAGGA
AAAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACGAATCGAGTTAATTACGTTGTGTTGCTAGCG
GAACTCCCTTCTAAATTAGGGAAAGAAGGGCTTTCGAAATCTAATACACACGTATAGATACTGGCATAGC
AAATGATTAATCACAGAACTCATATCATAATATAGGTTCTTTAATTCTTTTTTAAAATGAAAATAGGAAT
GATTATGAAATAGAAAATTCATAATTTTTTTAGAATTGTTGTGAATCCATTCCAATCGAATATTGAGTAA
TCAAATCCTTCAATTCATAGTTTTCGAAATCTTTTTAAAAGTGGATTAATCGGACGAGGATAAAGAGAGA
GTCCCATTCTACATGTCAATACTGACAACAATGAAATTTCTAGTAAAAGG |
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [RAP-DB] |