The detailed information of tRNA gene sequence


Sequence ID>AD01000011
Genome IDNC_003070
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr1
Start position on genome 2939417
End posion on genome 2939489
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaataggaaacagagtttggcttttgggcgaagaaacagctttaatttaataacacatgtattgtattaaatattatcacagtcaatacccaacaacaaa
tRNA gene sequence 
TCCGATGTCGTCCAGCGGTTAGGATATCTGGCTTTCACCCAGGAGACCCGGGTTCGATTC
CCGGCATCGGAGCgt
Downstream region at tRNA end position 
ttttggttttgtatcctttttatttttttcacaatgtatcttatatctattttaaaatcaagttattgctaagcaatctggtcaaattgatgatgtagtt
Secondary structure (Cloverleaf model)
>AD01000011	Glu	TTC
                   a      GCgt ttttggttttgtatcctttttatttttttcacaatgtatcttatatctattttaaaatcaagttattgctaagcaatctggtcaaattgatgatgtagtt
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     G G C C C     A
      C G A        C      | | | | |     G
    G       C C T G       C C G G G     C
    G       | | | +                 T T
    T       G G A T
      T A          A     AGAC
                    T + G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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