The detailed information of tRNA gene sequence


Sequence ID>AD01000014
Genome IDNC_003070
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr1
Start position on genome 4709634
End posion on genome 4709708
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
agtcttatgaagtatatattttattgcaatgagccttaaataaaaagtcataatttgttgttttattatataatgttatactgaacaagcattccaaaaG
tRNA gene sequence 
GCCTCCGTAGCATAGTGGTATTGCGTTCGCTTCGTAAGCGAAAGGCCGCGAGTTCGATCC
TCGCCGGGGGCTTCt
Downstream region at tRNA end position 
tttactcactcttttttatatctctttcttttttatgaaattagaatacaattcttcttagccacaactttccataactcaacaatatacataatcatca
Secondary structure (Cloverleaf model)
>AD01000014	Thr	CGT
                   G      TTCt tttactcactcttttttatatctctttcttttttatgaaattagaatacaattcttcttagccacaactttccataactcaacaatatacataatcatca
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          C T
                    T     C G C T C     A
        G A        A      | | | | |     G
      T     T A C G       G C G A G     C
      G       | | |                 T T
      G     T T G C
        T A        G     AGGCC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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