The detailed information of tRNA gene sequence


Sequence ID>AD01000108
Genome IDNC_003070
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr1
Start position on genome 29143161
End posion on genome 29143089
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
aaaagttacaaagtttccttttttctattttgtttccttttttctaatacgcatatattatgtatataaataagatagctttcacctaacaagcatccga
tRNA gene sequence 
GGTTCTATGGTGTAGTGGTTAGCACTCTGGACTTTGAATCCAGCGACCTGGGTTCGACTC
CCGGTAGGACCTCtt
Downstream region at tRNA end position 
tttgtttcttacatttttttagttattacttttcaaaattaaccctattatatcactcccacttctcttcttcttctgtcgccgaaaacgcagcttaagc
Secondary structure (Cloverleaf model)
>AD01000108	Gln	TTG
                   a      TCtt tttgtttcttacatttttttagttattacttttcaaaattaaccctattatatcactcccacttctcttcttcttctgtcgccgaaaacgcagcttaagc
                     G - C
                     G - C
                     T - A
                     T + G
                     C - G
                     T - A
                     A - T          T C
                    T     G G C C C     A
      T G A        G      | + | | |     G
    G       T G T G       C T G G G     C
    G       + | | |                 T T
    T       G C A C
      T A          T     CGAC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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