The detailed information of tRNA gene sequence


Sequence ID>AD01000131
Genome IDNC_003070
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr1
Start position on genome 16585776
End posion on genome 16585702
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtatagcgtactgaggagggaggctttcttgaatttgtggtgagggcactgagtggtatatcctttgaaacgttcccatgcggcagaaaatgattcagaa
tRNA gene sequence 
GTCGTTGTAGTATAGTGGTAAGGATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCC
TCGGCAACGACGCCA
Downstream region at tRNA end position 
aattgatacaagggttttgtgtgtcaattccctaaatgcatcttatgtcattgcagcatttaaggtgtcaatccaaatgggtgtaattgctaacaatcag
Secondary structure (Cloverleaf model)
>AD01000131	Asp	GTC
                   a      GCCA aattgatacaagggttttgtgtgtcaattccctaaatgcatcttatgtcattgcagcatttaaggtgtcaatccaaatgggtgtaattgctaacaatcag
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C          C T
                    T     G G C T C     A
      T G A        A      | | | + |     G
    G       T A T G       C C G G G     C
    G       +   | +                 T T
    T       G G A T
      A A          T     TGAC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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