The detailed information of tRNA gene sequence


Sequence ID>AD01000145
Genome IDNC_003070
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr1
Start position on genome 4522783
End posion on genome 4522708
Amino Acid Ile
Anticodon AAT
Upstream region at tRNA start position 
ttttgttttgttttgttttgttttgagtctcatagtttcatcattcgtcttctccacaaaattataaatcttaaacgtgtaatacataatgtcaacaaaT
tRNA gene sequence 
GGCCCATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAA
ACCTGCATGGGCCAAta
Downstream region at tRNA end position 
tgtcttttatttattgattttaacaccacaatatcggcccaataagacctttgtttttaaagcgtctacatattcattcgtgggccaaattcacaccgtt
Secondary structure (Cloverleaf model)
>AD01000145	Ile	AAT
                   T      AAta tgtcttttatttattgattttaacaccacaatatcggcccaataagacctttgtttttaaagcgtctacatattcattcgtgggccaaattcacaccgtt
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          A A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A
                    A A T
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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