The detailed information of tRNA gene sequence


Sequence ID>AD01000162
Genome IDNC_003071
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr2
Start position on genome 3452977
End posion on genome 3453063
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaaaaggtttccatttttaatagattgtttgtggttgtacctttactgcaagaatataaatgactcgctattcactcgaggtttctgggtcataatgta
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCGTAGCATTGGAACTGCTATGTAGGCTTTTGTTTA
CCGAGGGTTCGAATCCCTCTCTTTCCGtac
Downstream region at tRNA end position 
ctttacctaattcaccaacgttaccgaccgcgcaataccaatcgagacctctaagacgaactaaagggatgtctctaagcagccaaggccaagagcaagc
Secondary structure (Cloverleaf model)
>AD01000162	Ser	GGA
                   a      Gtac ctttacctaattcaccaacgttaccgaccgcgcaataccaatcgagacctctaagacgaactaaagggatgtctctaagcagccaaggccaagagcaagc
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTAGGCTTTTGTTTACC
                    T - A
                    A - T
                    G - C
                    C - G
                    A - T
                  T       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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