The detailed information of tRNA gene sequence


Sequence ID>AD01000164
Genome IDNC_003071
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr2
Start position on genome 3494381
End posion on genome 3494471
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaagaaacgaaactctataaaatatcataagagaagaagattttaattccagcttaaataagtaagacttgactctttaaaaaattccgatcaacaacT
tRNA gene sequence 
GGAGGGATGGCTGAGTGGCTTAAGGCATTGGTTTGCTAAATCGACATACAAGAAGATTGT
ATCATGGGTTCGAATCCCATTTCCTCCGGCg
Downstream region at tRNA end position 
cggaagtgaaacgggcgggcgaaatgagaagagcactacttagtgactaggagcggggagcccgttgcgcgtttttttgtttgaccggcctatcttcata
Secondary structure (Cloverleaf model)
>AD01000164	Ser	GCT
                   T      GGCg cggaagtgaaacgggcgggcgaaatgagaagagcactacttagtgactaggagcggggagcccgttgcgcgtttttttgtttgaccggcctatcttcata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     A - T          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       A T G G G     C
    G         + | |                 T T
    C       A G G C
      T T A        A     CATACAAGAAGATTGTATC
                    T - A
                    T + G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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