The detailed information of tRNA gene sequence


Sequence ID>AD01000166
Genome IDNC_003071
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr2
Start position on genome 3495442
End posion on genome 3495512
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gccgccggtcatatagagcgctccgcccgccccagcatatgtataaaaaagagggaagaaagaacaaccgttttactttggcacatgaggtggcgggttt
tRNA gene sequence 
GGCTAGGTAACATAATGGAAATGTATCGGACTGCAAATCCTGTAATGACGGTTCGACTCC
GTCCTTGGCCTaca
Downstream region at tRNA end position 
ccttcatgaccagaaataactggaacaaagggaaagcccactcaactagtaacatacggacacaaacaacaaaactacttgttacaaataacatcttgtt
Secondary structure (Cloverleaf model)
>AD01000166	Cys	GCA
                   t      Taca ccttcatgaccagaaataactggaacaaagggaaagcccactcaactagtaacatacggacacaaacaacaaaactacttgttacaaataacatcttgtt
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     G + T
                     G - C          T C
                    T     C T G C C     A
        A A        A      | | | | |     G
      T     T A C A       G A C G G     C
      G     | | | |                 T T
      G     A T G T
        A A        A     TAAT
                    T + G
                    C   T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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