The detailed information of tRNA gene sequence


Sequence ID>AD01000216
Genome IDNC_003071
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr2
Start position on genome 11864225
End posion on genome 11864154
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
caagtggactacagagtatgaaagaaagtctagtagttttggaacgctcgacaattaaattcgattttatttttaaattgtaatatataaatcacaagta
tRNA gene sequence 
GCGTCTGTAGTCCAACGGTTAGGATAATTGCCTTCCAAGCAATAGACCCGGGTTCGACTC
CCGGCAGACGCAtta
Downstream region at tRNA end position 
tcattatttttatattttgaattgttttcactgaatttttaattcaatgaaggcaaagcaaactagaagaaaatgagtctttttttctttctttctaact
Secondary structure (Cloverleaf model)
>AD01000216	Gly	TCC
                   a      Atta tcattatttttatattttgaattgttttcactgaatttttaattcaatgaaggcaaagcaaactagaagaaaatgagtctttttttctttctttctaact
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T C
                    T     G G C C C     A
      C A A        A      | | | | |     G
    G       C C T G       C C G G G     C
    G       | | | +                 T T
    T       G G A T
      T A          A     AGAC
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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