The detailed information of tRNA gene sequence


Sequence ID>AD01000227
Genome IDNC_003071
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr2
Start position on genome 3303315
End posion on genome 3303244
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cagctggttagagcaaaggactgtaaatccttgtgtcagtggttcgaatccacaaccacttctattctcggagctgaggtatatgaagaatggccttttg
tRNA gene sequence 
GTCCCTTTCGTCCAGTGGTTAGGACATCGTCTTTTCATGTCGAAGACACGGGTTCGATTC
CCGTAAGGGATAggt
Downstream region at tRNA end position 
actcattctcggccgctttcagttagtgttcattgctgagggatcccgagatctcgaagcagatgaccaagtgagctccgcagccgttagtgcaagggct
Secondary structure (Cloverleaf model)
>AD01000227	Glu	TTC
                   g      Aggt actcattctcggccgctttcagttagtgttcattgctgagggatcccgagatctcgaagcagatgaccaagtgagctccgcagccgttagtgcaagggct
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A          T T
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       C C T G       A C G G G     C
    G       | | | |                 T T
    T       G G A C
      T A          A     AGAC
                    T - A
                    C - G
                    G - C
                    T   T
                    C - G
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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