The detailed information of tRNA gene sequence


Sequence ID>AD01000240
Genome IDNC_003074
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr3
Start position on genome 2222245
End posion on genome 2222319
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
attgtttcaccattttttatgattttttcttcgtattttcacatgtcgacttttttgtaatataagattcaatgttttcaaatatcagaatataagtatT
tRNA gene sequence 
GGTGCTGTGGTGTAGTGGTTATCACGTTTGCCTTACACGCAAAAGGTCTCCAGTTCGATC
CTGGGCAGCACCATtt
Downstream region at tRNA end position 
tttactctcagagatattaaagaaaactcatatgttcttcgtatcaccacatttcaaaacaattaattttgtgtttctgactaagaattaatcaaatttt
Secondary structure (Cloverleaf model)
>AD01000240	Val	TAC
                   T      ATtt tttactctcagagatattaaagaaaactcatatgttcttcgtatcaccacatttcaaaacaattaattttgtgtttctgactaagaattaatcaaatttt
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     G G G T C     A
      T G A        G      + | | | |     G
    G       T G T G       T C C A G     C
    G         | | |                 T T
    T       T C A C
      T A          G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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