The detailed information of tRNA gene sequence


Sequence ID>AD01000248
Genome IDNC_003074
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr3
Start position on genome 4254528
End posion on genome 4254608
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
ctctctctacgtatatttatacgctgacgtcactgtttatcgatttcctcctcattatttgattgttttgtacgcgtttaatggaaggagagacaacaaa
tRNA gene sequence 
GTTGATATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGG
GTTCAAATCCCACTGTCAACAatt
Downstream region at tRNA end position 
tactttttttttttttgtctttttacaagaataggaaaaatagacagctgtgtaaaaaaatattaactttgttttgtttccacaagtcgatgtccaaatt
Secondary structure (Cloverleaf model)
>AD01000248	Leu	AAG
                   a      Aatt tactttttttttttttgtctttttacaagaataggaaaaatagacagctgtgtaaaaaaatattaactttgttttgtttccacaagtcgatgtccaaatt
                     G - C
                     T - A
                     T - A
                     G - C
                     A - T
                     T + G
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     A
  G         G C C G       G T G G G     C
  G           | | |                 T T
  T         A G G C
    C T A          G     TCCGAAAGGGC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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