The detailed information of tRNA gene sequence


Sequence ID>AD01000254
Genome IDNC_003074
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr3
Start position on genome 7104308
End posion on genome 7104393
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tctttcaaggaggcagcagggattcgacttcccctgggggtagggtactacgaaaggaagttgatcatggattatccataaagttagaatagattcttcT
tRNA gene sequence 
GGGTCGATGCCCGAGCGGTTAATGGGGACGGACTGTAAATTCGTTGGCAATATGTCTACG
CTGGTTCAAATCCAGCTCGGCCCAAta
Downstream region at tRNA end position 
attagctgtctacataaccattttttttttttgcataaatgacagagaaggggtaagaaaaaaaggtcaaatttcagggtatagggtatagttcgacttt
Secondary structure (Cloverleaf model)
>AD01000254	Tyr	GTA
                   T      AAta attagctgtctacataaccattttttttttttgcataaatgacagagaaggggtaagaaaaaaaggtcaaatttcagggtatagggtatagttcgacttt
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T          T A
                    T     C G A C C     A
      C G A        G      | | | | |     A
    G       G C C C       G C T G G     C
    G       + | | |                 T T
    T       T G G G
      T A A        G     TGGCAATATGTCTAC
                    A - T
                    C - G
                    G - C
                    G + T
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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