The detailed information of tRNA gene sequence


Sequence ID>AD01000305
Genome IDNC_003074
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr3
Start position on genome 5068367
End posion on genome 5068294
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
gatgcaagaatttgggaatagtaatgtttaattcattaattgctaaaaaggattaataaaaaaaaggagaaataaaagtatggaacataatattcaaaca
tRNA gene sequence 
GGTCCCGTAGCTCAGTTGGTTAGAGCGTTGGTCTTATGAGCCGAAGGTCGCGGGTTCGAG
CCCCGCCGGGACCAatg
Downstream region at tRNA end position 
gttgaaaatttatttgttttacatcatcctcttttgccaatctcatcctttatttgatcggtctccacaatcttagcctaaactaataaaaatatcagaa
Secondary structure (Cloverleaf model)
>AD01000305	Ile	TAT
                   a      Aatg gttgaaaatttatttgttttacatcatcctcttttgccaatctcatcctttatttgatcggtctccacaatcttagcctaaactaataaaaatatcagaa
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          C G
                    T     C G C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T + G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       G
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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